Virtual Crash Course: Exploring Computed Structure Models from Artificial Intelligence/Machine Learning at RCSB.org

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Thursday, September 22nd 2022 • 1:00-3:00 PM EDT

Registration (required): go.rutgers.edu/zmo5wlnx

More than 1 million Computed Structure Models (CSMs) from AlphaFold2 and RoseTTAFold are now being delivered simultaneously with ~200,000 experimentally-determined PDB structures via RCSB.org. Learn how to search, visualize, and analyze CSMs alongside PDB structures using all of the same RCSB PDB features that you know and love.

Program | Download Printable Program

1:00–1:05 pm
Introductions
Stephen K. Burley, M.D., D.Phil., Director,
RCSB PDB/Rutgers & UCSD
1:05–1:20 pm

What is in a Computed Structure Model?
Meet AlphaFold and RoseTTAFold
Brinda Vallat, Ph.D., RCSB PDB/Rutgers
1:20–1:40 PM How do I find models? Simple Searching Case Study
and intro to Structure Summary Pages
Shuchismita Dutta, Ph.D., RCSB PDB/Rutgers
1:40–1:50 pm Group Summary Pages and 1D-3D
Joan Segura, Ph.D., RCSB PDB/UCSD
1:50–2:10 pm Advanced Searching
Joan Segura, Ph.D.

2:10–2:25 pm

 Confidence Levels in 3D Predictions
Chenghua Shao, Ph.D., RCSB PDB/Rutgers
2:25-2:55 pm Visualization, Validation, and Alignments
Sebastian Bittrich, Ph.D., RCSB PDB/UCSD

2:55-3:00 pm

Conclusion and Methods for Sending Feedback
Stephen K. Burley, M.D., D.Phil.

 

                               

CO-SPONSORS:

     RCSB Protein Data Bank                                            Institute for Quantitative Biomedicine (IQB)
                            rcsb.org                                                                                   iqb.rutgers.edu

 

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